This is a list of Vancouver Island Junior Hockey League Standings for the 1999-00 season.
Standings[]
Northern Division[]
| # | Team | GP | W | L | T | Pts | GF | GA | PIM |
| 1 | Campbell River Storm | 40 | 24 | 10 | 6 | 54 | 187 | 144 | 1933 |
| 2 | Comox Valley Glacier Kings | 40 | 22 | 11 | 7 | 51 | 179 | 130 | 1493 |
| 3 | Port Alberni Bandits | 40 | 20 | 14 | 6 | 46 | 217 | 150 | 2009 |
| 4 | Parksville Generals | 40 | 8 | 29 | 3 | 19 | 163 | 270 | 1760 |
Southern Division[]
| # | Team | GP | W | L | T | Pts | GF | GA | PIM |
| 1 | Kerry Park Islanders | 40 | 25 | 7 | 8 | 58 | 201 | 135 | 1578 |
| 2 | Peninsula Panthers | 40 | 23 | 15 | 2 | 48 | 241 | 185 | 1795 |
| 3 | Victoria Cougars | 40 | 11 | 22 | 7 | 29 | 168 | 219 | 1646 |
| 4 | Saanich Braves | 40 | 6 | 31 | 3 | 15 | 160 | 268 | 2874 |