This is the 1999-00 Midwest Collegiate Hockey Association season. This was the league's second season.
- Benedictine Eagles leave the conference when the school drops men's hockey as a varsity sport
- Findlay Oilers jumped to Division I's College Hockey America
- Minnesota-Crookston Golden Eagles join the conference
|Midwest Collegiate Hockey Association||Overall Record|
|Minnesota-Crookston Golden Eagles||10||10||0||0||62||13||32||18||15||3||0||88||43|
|Milwaukee School of Engineering Raiders||14||8||6||0||55||52||16||27||13||12||2||97||108|
- MN-Crookston defeated Northland 6-4
- Marian defeated MSOE 3-2
- MSOE defeated Northland 9-4
- MN-Crookston defeated Marian 4-3
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